Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797322.1_cds_XP_016454756.1_4836
CDS Infomation

[gene=LOC107778936] [db_xref=GeneID:107778936] [protein=serine/threonine-protein kinase rio2-like] [protein_id=XP_016454756.1] [location=complement(join(4207..4464,5967..6086,9269..9437,9646..9693,10217..10290,10514..10631,12519..12607,12936..13111,13216..13329,13428..13498,13591..13637,13737..13820))] [gbkey=CDS]
Sequence

ATGAAGTTGGATGTCAACGTTTTGAGATACCTCTCCAAAGATGATTTCCGGGTCCTCACT
GCCGTTGAGATGGGCATGCGCAATCATGAAATTGTGCCTTCTGAGCTCATTGACCGTATT
GCTTCCCTCAAGCATGGGGGCTCATATAAAGTGTTGAAGAATTTGCTAAAGCACAAATTA
GTCCATCATGATGCTTCTAAATATGATGGATTTCGACTCACCTACCTTGGTTACGATTTT
CTTGCAATCAAAACTATGGTTAATCGTGGTGTATTTAATGGAGTGGGTCGTCAACTTGGC
ACTGGGAAAGAGTCTGATATTTTTGAGGTCGTAAAGGAAGATGGCACAGTTCTTGCGATG
AAGTTACACAGGCTCGGTAGGGTTTCATTTAGGGCAGTCAAAGCAAAACGTGACTATTTG
AGGCATCGTAGCAGCTATAATTGGCTCTACTTATCGCGGCTTGCTGCCTTGAAAGAGTTT
GCATTTATGAAGGCACTAGAAGAACATGGATTCCCTGTTCCAAATGCTGTCGATTGCAAT
CGACATTGTTTGATTATGTCACTTGTACCAGGCTATCCACTTGTGCAGGTTAAGGAGCTG
CAAAACCCAGATGTGGTTTTTGAAACAATCATTGGTGCTGTTGTTCGTCTGGCAGAACAC
GGGCTTATTCACTGCGATTTTAATGAATTTAACATAATGATTGATGATGATGAAAAGGTC
ACCATGATTGATTTCCCGCAAATGGTGTCAGTCTCTCATCCTAATGCCCAAATGTATTTT
GACCGTGATGTGGAGTGCATCTACAAGTTCTTTGAAAAGCGGTTCAATATGTTATTTGAA
GAAAATGAAAATGATTCTGATGGTTCAGAGGCTGAAATAGATGAAGTTGGACGGCCCCAG
TTCTCTGAAATAAACAAAAATAGCGGTTTCTTGGACAAAGAACTTGCTGCCAGTGGTTTT
ACAAGAAAGGATCAAAATGAGTTGGAAAAGTTAACTGAGGCAGAGCTTGACATGTATTCA
GATTCTGATGATGAAGGAACTGGTGATGATGAAGATGAAGACATGAACGAGACAAACATC
AAGCAGCTTGAATCCTTGCAGTTGGAGAAGGAGGACAACAATCATCTAGTTGGGGATGAG
CATGATGATAATCATCAAGTTGGGGATGAGCATGATCCTGAGGATGATGGAGAGGCCGAG
TCTGAAGATGATGCCGAACTTGTGAAGAGCCTGAGCAAGCAGAGGAGGAAGGCCATTCAA
GCTGCCCATCGGGGGAAGAGGAACTTTGCCTCCAGGAATACATACAAGGACAAAGGTGGG
AAATCCTCACAGAGTTCAAAGGTCCATAAGCATTTGGGTGGCTGGTAA

Peptide Sequence

PEP ID

XP_016454756.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase rio2-like [Nicotiana tabacum]
Sequence

MKLDVNVLRYLSKDDFRVLTAVEMGMRNHEIVPSELIDRIASLKHGGSYKVLKNLLKHKL
VHHDASKYDGFRLTYLGYDFLAIKTMVNRGVFNGVGRQLGTGKESDIFEVVKEDGTVLAM
KLHRLGRVSFRAVKAKRDYLRHRSSYNWLYLSRLAALKEFAFMKALEEHGFPVPNAVDCN
RHCLIMSLVPGYPLVQVKELQNPDVVFETIIGAVVRLAEHGLIHCDFNEFNIMIDDDEKV
TMIDFPQMVSVSHPNAQMYFDRDVECIYKFFEKRFNMLFEENENDSDGSEAEIDEVGRPQ
FSEINKNSGFLDKELAASGFTRKDQNELEKLTEAELDMYSDSDDEGTGDDEDEDMNETNI
KQLESLQLEKEDNNHLVGDEHDDNHQVGDEHDPEDDGEAESEDDAELVKSLSKQRRKAIQ
AAHRGKRNFASRNTYKDKGGKSSQSSKVHKHLGGW

Transcript Sequence

Gene sequence data has not been registered.